In situ Hybridization for Tyrosinase
Ariadna Laguna, Miquel Vila
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Abstract
In situ hybridization protocol with DIG-labelled riboprobes
Steps
Brain sectioning
Paraformaldehide perfused brains are cryoprotected in 30% sucrose and frozen with cold isopentane.
Frozen brains are cryosectioned at 30 microns in a cryostat
Cryosections are mounted on superfrost slides and dried over-night at room temperature before storing them at -80ºC until processing
In situ hybridization
Sections are fixed for 10 min in 4% paraformaldehyde
After washing in PBS, sections are permeabilized with Proteinase K for 5 min (1 μg/mL Proteinase K,
50mM Tris·HCl, and 5 mM EDTA)
Refix in 4% paraformaldehyde for 10 min
After rinsing in PBS, proceed with the acetylation step for 10 min with 590
mL of H 2O, 8 mL of triethanolamine, 1 mL of 37% HCl, and 1.5 mL of acetic
anhydride
Incubate for 3 h at room temperature for
prehybridization (50% formamide, 5× SSC, 5× Denhardt’s solution, 250 μg/mL Baker’s yeast RNA, and 500 μg/mL salmon sperm DNA)
Hybridization overnight at 72 °C in
120 μL prehybridization mix
with 2 μL of
digoxigenin-labeled sense (control probe not complementary) and antisense (test
probe complementary) probes for tyrosinase (Riboprobes are generated by PCR and labelled with
the DIG RNA labelling kit from Roche (11175033910))
Wash in 72 °C heated solutions of 5× SSC and 0.2×
SSC, and then equilibrated in B1 buffer [0.1 M Tris·HCl (pH 7.5) and 0.15 M
NaCl]
Preincubation for 1 h in 10% heat-in-activated FCS
in B1 buffer
Incubate overnight with antidigoxigenin-AP Fab
fragments (Roche, diluted 1:5,000 in B1 with 1% heat-inactivated FCS)
Wash in B1 buffer and placed the sections in a
solution of 0.1 M Tris·HCl (pH 9.5), 0.1 M NaCl, and 50 mM MgCl 2 (B2 buffer)
mRNA localization is visualized after overnight incubation with 0.2 mM NBT/BCIP (Roche) and 0.24 μg/mL levamisole in 10% PVA/B2 solution protected from light
The color reaction is terminated by water and mounted in Aquatex (Merck)
Sections are analysed and photographed with a microscope coupled to a camera