Expression and purification MBP-ATG9 Constructs

Adam Yokom

Published: 2022-07-11 DOI: 10.17504/protocols.io.6qpvr6nkovmk/v1

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Abstract

Expression and purification from HEK cells of ATG13, ATG101 and FOLDON-ATG9A proteins

Steps

Expression

1.

Transfect HEK GNTI cells at concentration of 2 × 106cells/ml

2.

Dilute PEI with Warm Hybridoma-SFM(1X)

3.

In a separate tube, dilute DNA with Hybridoma-SFM(1X)

4.

Add PEI to DNA dilution. Incubate mixture for 0h 30m 0s at 37°C

5.

Add mixture to cells. Let cells grow for 48h 0m 0s

6.

Harvest Cells 500rpm,4°C

7.

Wash pellet with cold PBS. Store pellet at -80C until purification.

Purification

8.

Resuspended pellet in lysis buffer (25 mM HEPES pH 7.5, 200 mM NaCl, 2 mM MgCl2, 1 mM TCEP, 5 mM EDTA, 10% Glycerol) with 1% Triton X-100 and protease inhibitor cocktail (Thermo Scientific, Waltham, MA)

9.

Wash Amylose resin with lysis buffer, ~2mL/1 Liter of cells

10.

Clarify lysate by centrifugation 17000rpm,4°C

11.

Load supernatant flow thru gravity column onto washed Amylose resin

12.

Rock supernatant with equilibrated resin for 1h 0m 0s at 4°C

13.

Wash with 5 column volumes of lysis buffer (25 mM HEPES pH 7.5, 200 mM NaCl, 2 mM MgCl2, 1 mM TCEP, 5 mM EDTA, 10% Glycerol)

14.

Elute with lysis buffer plus 40 mM Maltose for amylose resin

15.

Concentrate elution and inject onto pre-equilibrated S200 10/30 column (25 mM HEPES pH 7.5, 200 mM NaCl, 2 mM MgCl2, 1 mM TCEP, 5 mM EDTA)

16.

Pool peak fractions, concentrate, snap freeze, and store at -80C

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