Engineering megabase-sized genomic deletions with MACHETE (Molecular Alteration of Chromosomes with Engineered Tandem Elements) Francisco M. Barriga, Scott W. Lowe Published: 2024-02-07 DOI: 10.1038/s41596-024-00953-9 CRISPR-Cas9 MACHETE genomic deletions selection cassette site-specific nucleases AI 解读 浏览 1299 PDFMetadataSupplementary information Reporting Summary 推荐阅读 Nature Protocols Protocols IO Current Protocols Purification of infection-associated macropinosomes by magnetic isolation for proteomic characterization Hi-CO: 3D genome structure analysis with nucleosome resolution Practical and concise synthesis of nucleoside analogs Comprehensive analysis of glycosphingolipid glycans by lectin microarrays and MALDI-TOF mass spectrometry Human primordial germ cell-like cells specified from resetting precursors develop in human hindgut organoids KAS-seq: genome-wide sequencing of single-stranded DNA by N3-kethoxal–assisted labeling Detecting chromosomal interactions in Capture Hi-C data with CHiCAGO and companion tools Capture of the newly transcribed RNA interactome using click chemistry Design, assembly, and characterization of membrane-spanning DNA nanopores Transcriptome-wide identification of RNA-binding protein binding sites using seCLIP-seq 查看全部 Concentration and nucleic acid extraction of viruses from aggregated airplane waste wastewater-based epidemiology WBE aggregated airplane waste airplane wastewater wastewater viral concentration viromics metagenomics Enhancing the growth of coral microfragments using the 'Green Film' Husbandry Method microfragmentation microfragment coral stony coral aquarium husbandry aquaculture coral culture DNA extraction from recently fertilised Atlantic salmon embryos for use in microsatellite validation of triploidy DNA extraction DNA quality and quantity assessments Microsatellites validation assessment Egg Tiploid Salmon How to grow wheat in controlled and semi-controlled environment Wheat Germination Transplanting Threshing Vernalisation Preparation of 1M calcium chloride solution (CaCl2) ngm worm c.elegans c elegans elegans caenorhabditis media medium calcium chloride RNA-Stable Isotope Probing Stable isotope probing SIP RNA Ultracentrifugation Density gradient Resuspension and concentration of iron chloride precipitated viruses from seawater for HMW DNA extraction Patch-Seq Recording and Extraction Detailed Protocol Patch-Seq patch seq recording electrophysiology neuron PF0301 patching extraction extracting Confirmation of Gene Knockdown with RT-qPCR ASAPCRN DTI preprocessing, statistical and cluster analysis diffusion tensor imaging 查看全部 Exploring Non-Coding RNAs in RNAcentral Galaxy ncRNA non-coding RNA RNAcentral RNA-seq Purification of SRSF1 from E. coli for Biophysical and Biochemical Assays intrinsically disordered proteins NMR phase separation phosphorylation RNA splicing SR protein SRSF1 Rapid Tagging of Human Proteins with Fluorescent Reporters by Genome Engineering using Double-Stranded DNA Donors Cas9 CRISPR double-stranded DNA donors fluorescent protein genome engineering homology-directed repair tissue culture cells Engineering Ligand and Receptor Pairs with LIPSTIC to Track Cell-Cell Interactions cell-cell interactions enzymatic labeling immune interactions LIPSTIC Streptozotocin-Induced Diabetic Models in Mice and Rats high-fat hyperglycemia insulin deficiency insulin resistance insulitis mouse or rat nicotinamide streptozotocin type 1 diabetes mellitus type 2 diabetes mellitus Solid-Supported Membrane (SSM)-Based Electrophysiology Assays Using Surface Electrogenic Event Reader Technology (SURFE²R) in Early Drug Discovery drug discovery high-throughput screening solid-supported membrane (SSM)-based electrophysiology SURFE²R assay Cassava Metabolomics and Starch Quality chemotypes Manihot esculenta metabolite classification metabolite profiling metabolomics Assessing Protein Synthesis and Degradation Rates in Arabidopsis thaliana Using Amino Acid Analysis 13CO2 labeling protein degradation protein synthesis The COPILOT Raw Illumina Genotyping QC Protocol docker genotyping GWAS Illumina QC pipeline The MegaPool Approach to Characterize Adaptive CD4+ and CD8+ T Cell Responses AIM epitopes infectious diseases lyophilization SARS-CoV-2 T cell 查看全部