Suggested protocol for loading a DNA Ladder/marker

New England Biolabs

Published: 2022-04-11 DOI: 10.17504/protocols.io.zkxygx6zg8j2/v2

Abstract

This is the suggested protocol for use with:

Quick-Load®Purple 1 kb DNA Ladder (N0552)

Quick-Load®Purple 100 bp DNA Ladder (N0551)

Quick-Load®Purple 50 bp DNA Ladder (N0556)

Quick-Load®1 kb Extend DNA Ladder (N3239)

Quick-Load®1 kb DNA Ladder (N0468)

Supercoiled DNA Ladder (N0472S)

λ DNA-Mono Cut Mix (N3019)

фX174 DNA-HaeIII Digest (N3026)

pBR322 DNA-BstNI Digest (N3031)

pBR322 DNA-MspI Digest (N3032)

2-Log DNA Ladder (0.1-10.0 kb) (N3200)

100 bp DNA Ladder (N3231)

1 kb DNA Ladder (N3232)

Low Molecular Weight DNA Ladder (N3233)

50 bp DNA Ladder (N3236)

Before start

This protocol is recommended for a 5 mm wide gel lane. The components of the mixture should be scaled up or down, depending on the width of the lane.

Steps

1.

Prepare loading mixture ( 6 μl total volume):

Note
Dilute only 1 µl of DNA Ladder at a time.

AB
Distilled water (dH20)* or TE Buffer4 μl
Gel Loading Dye, Purple (6X), no SDS1 μl
DNA Ladder/Marker1 μl
Total Volume6 μl

*For multiple loads, dilution, and storage, use TE or other buffer of minimal ionic strength instead of water. DNA may denature if diluted and stored in dH20.

2.

Mix gently by pipetting.

3.

Load onto the agarose gel.

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