EXPRESSION AND PURIFICATION OF HUMAN NEMO (GST-GFP-NEMO)

Elisabeth Holzer

Published: 2023-07-31 DOI: 10.17504/protocols.io.261gedpojv47/v1

Abstract

This protocol describes how to express and purify human NEMO (IKK-γ) tagged N-terminally with GST and EGFP. The expression is performed with E. coli Rosetta pLysS cells. The protein is purified via a GST batch purification and gel filtration (SEC).

Before start

Lysis Buffer:

50 mM HEPES pH 7.5

300 mM NaCl

2 mM MgCl2

Freshly added: 2 mM β-Mercaptoethanol, Roche Protease Inhibitor (Merck, #5056489001), and DNAse I (Sigma, #DN25-1G)

Wash Buffer 1:

50 mM HEPES pH 7.5

300 mM NaCl

Freshly added: 1 mM DTT

Wash Buffer 2:

50 mM HEPES pH 7.5

700 mM NaCl

Freshly added: 1 mM DTT

SEC Buffer:

25 mM HEPES pH 7.5

150 mM NaCl

Freshly added: 1 mM DTT

Steps

Expression

1.

Grow E. coli Rosetta (DE3) pLysS cells in 2L LB medium at 37°C until achieving an OD600 nmof 0.4.

2.

Reduce temperature to 18°C and continue growth to OD600 nmof 0.8.

3.

Induce protein expression with 250micromolar (µM) IPTG and continue growth for ~16h 0m 0s at 18°C

4.

Centrifuge the cells at 3000 rcf (4°C ,0h 15m 0s )

5.

Aspirate media and resuspend cell pellet in ~ 10 ml of 1X PBS, centrifuge the cells at 3000 rcf (4°C ,0h 15m 0s ) and take off the supernatant.

6.

Flash freeze the pellet in liquid nitrogen and store at -80°C until use.

6.

Purification

7.

Thaw pellet and resuspend in Lysis Buffer with freshly added 2millimolar (mM) β-Mercaptoethanol, Roche Protease Inhibitor and DNAse I

8.

Sonicate sample 0h 0m 30s at 65% power for 5 cycles (Bandelin Sonopuls)

8.1.

Repeat sonication for a total of 3X

9.

Centrifuge at 48000 rcf at 4°C for 0h 45m 0s

9.1.

During this step, equilibrate 3mL Glutathione Sepharose 4B beads by washing the slurry with water and Wash Buffer 1 (~ 6 ml).

10.

Filter supernatant after centrifugation through a 0.45 µm syringe filter

11.

Incubate the sample on equilibrated beads on a tube roller at 4°C for 4h 0m 0s

12.

Wash beads 5X with Wash Buffer 1

13.

Wash beads 1X with Wash Buffer 2

Note
These wash steps remove nonspecific proteins

14.

Wash beads 2X with Wash Buffer 1

Note
These washes remove high salt concentration

15.

Cleave the resulting sample to produce GFP-NEMO by incubating with thrombin 4h 0m 0s at 4°C

16.

Centrifuge beads at 3000 rcf for 0h 3m 0s at 4°C

17.

Collect supernatant and filter through .45 µm syringe filter

18.

Concentrate product to a final volume of 500µL using a 10 kDa MWCO concentrator

19.

The concentrated and filtered protein can be applied onto a Superose 6 increase column (10/300 Cytiva) pre-equillibrated with SEC buffer

Note
This step can remove contamination and degradation products

20.

Fractions containing the purified proteins are pooled, concentrated, frozen in liquid nitrogen and stored at - 80°C

Note
Protein purity can be determined by SDS PAGE analysis and measurement of protein concentration

推荐阅读

Nature Protocols
Protocols IO
Current Protocols
扫码咨询