EXPRESSION AND PURIFICATION OF HUMAN NEMO (GST-GFP-NEMO)
Elisabeth Holzer
Abstract
This protocol describes how to express and purify human NEMO (IKK-γ) tagged N-terminally with GST and EGFP. The expression is performed with E. coli Rosetta pLysS cells. The protein is purified via a GST batch purification and gel filtration (SEC).
Before start
Lysis Buffer:
50 mM HEPES pH 7.5
300 mM NaCl
2 mM MgCl2
Freshly added: 2 mM β-Mercaptoethanol, Roche Protease Inhibitor (Merck, #5056489001), and DNAse I (Sigma, #DN25-1G)
Wash Buffer 1:
50 mM HEPES pH 7.5
300 mM NaCl
Freshly added: 1 mM DTT
Wash Buffer 2:
50 mM HEPES pH 7.5
700 mM NaCl
Freshly added: 1 mM DTT
SEC Buffer:
25 mM HEPES pH 7.5
150 mM NaCl
Freshly added: 1 mM DTT
Steps
Expression
Grow E. coli Rosetta (DE3) pLysS cells in 2L
LB medium at 37°C
until achieving an OD600 nmof 0.4.
Reduce temperature to 18°C
and continue growth to OD600 nmof 0.8.
Induce protein expression with 250micromolar (µM)
IPTG and continue growth for ~16h 0m 0s
at 18°C
Centrifuge the cells at 3000 rcf (4°C
,0h 15m 0s
)
Aspirate media and resuspend cell pellet in ~ 10 ml of 1X PBS, centrifuge the cells at 3000 rcf (4°C
,0h 15m 0s
) and take off the supernatant.
Flash freeze the pellet in liquid nitrogen and store at -80°C
until use.
Purification
Thaw pellet and resuspend in Lysis Buffer with freshly added 2millimolar (mM)
β-Mercaptoethanol, Roche Protease Inhibitor and DNAse I
Sonicate sample 0h 0m 30s
at 65% power for 5 cycles (Bandelin Sonopuls)
Repeat sonication for a total of 3X
Centrifuge at 48000 rcf at 4°C
for 0h 45m 0s
During this step, equilibrate 3mL
Glutathione Sepharose 4B beads by washing the slurry with water and Wash Buffer 1 (~ 6 ml).
Filter supernatant after centrifugation through a 0.45 µm
syringe filter
Incubate the sample on equilibrated beads on a tube roller at 4°C
for 4h 0m 0s
Wash beads 5X with Wash Buffer 1
Wash beads 1X with Wash Buffer 2
Wash beads 2X with Wash Buffer 1
Cleave the resulting sample to produce GFP-NEMO by incubating with thrombin 4h 0m 0s
at 4°C
Centrifuge beads at 3000 rcf for 0h 3m 0s
at 4°C
Collect supernatant and filter through .45 µm
syringe filter
Concentrate product to a final volume of 500µL
using a 10 kDa MWCO concentrator
The concentrated and filtered protein can be applied onto a Superose 6 increase column (10/300 Cytiva) pre-equillibrated with SEC buffer
Fractions containing the purified proteins are pooled, concentrated, frozen in liquid nitrogen and stored at - 80°C