Preparing Agarose Gel

alyssa.jeng

Published: 2023-03-12 DOI: 10.17504/protocols.io.kqdg391q1g25/v1

Abstract

N/A

Steps

Materials

1.

1X TAE Buffer* SYBRsafe

  • Agarose powder
  • Weigh boat
  • 500mL Erlenmeyer flask
  • Gel Electrophoresis tray
  • Gel Electrophoresis comb
  • Tape

Procedure

2.

Tape up the gel electrophoresis tray and add well comb

3.

Add 200mL of 1X TAE buffer to the Erlenmeyer flask

4.

Weigh the right amount of agarose powder - depends on the expected PCR products: smaller than 500 bp: 2% agarose gel – 4 gr/200mL; bigger than 500 bp: 1% agarose gel – 2 gr/200mL).

5.

Microwave for 2-3 minutes

6.

Carefully remove flask from microwave and add 20uL of SYBRsafe to the gel solution. Swirl to mix.

7.

Slowly pour the mixture in to the electrophoresis tray

8.

Let cool for at least 30 minutes (no longer than 2 hours)

9.

Clean the Erlenmeyer flask to remove excess agarose gel

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