Field sampling for drinking water

Christopher LeBoa, Sneha Shrestha

Published: 2023-09-26 DOI: 10.17504/protocols.io.ewov1o6bplr2/v1

Abstract

The method we used for sampling drinking water for households when detecting S. Typhi and Paratyphi in Nepal

Steps

1.

All water will be collected at the point closest to the origination of that water supply prior to end- user treatment to minimize the time for S. Typhi or Paratyphi DNA to degrade in

water, if present. If the only option is to sample from water that has been stored, choose the

freshest (most recently stored) source.

Sample Collection

2.

Pre-label all Whirl-Pak bags with a fill line representing 1 litre of water

a. Fill a bag with exactly 1 litre of water in the lab. Mark the outside of the bag with a

line where the water reaches. Copy this line to the rest of the Whirl-Pak bags.

3.

Place two duplicate random number stickers on the Whirl-Pak bag.

4.

Put on gloves and ipen the bag, taking care not to touch the inside of the bag

5.

Fill the bag with 1 liter or water

5.1.

If necessary, ask the household member to turn on the water spigot so that you do not contaminate your gloves.

5.2.

If the household uses water from a communal spigot, collect from this point

i. If a hose is connected to a communal spigot, remove it to collect directly from the tap

5.3.

If the community spigot is not functioning/the water is not running, sample water from the house or building collection tank, using the sterile hand pump

5.4.

If the storage tank in inaccessible, you can sample from stored water in a jug

i. Choose the freshest source of stored water (the one that was stored the most recently) ii.Avoid using a cup or container to transfer water from the jug If the container is too heavy to lift and pour into the Whirl-Pak bag, you can request to use the same cup or device the household uses to transfer water.

6.

Close the bag with the pipe-locking device

7.

Remove gloves

8.

Scan the sample barcode into RedCap

9.

If the code does not scan, manually enter it

10.

Take a picture of the sample in the RedCap app, making sure that you can see the

barcode number

Sample transport

11.

Place the full bag Whirl-Pak in an upright plastic bottle inside the cooler bag/backpack

11.1.

Unused Whirl-Pak bags should be kept in a separate compartment from water

samples

12.

Minimize opening and closing the cooler to maintain temperature control.

13.

If maintaining temperature control is a challenge, consider placing temperature loggers

inside each cooler bag.

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