DESS (DMSO/EDTA/NACL) Protocol

Mirayana Marcelino Barros, Tiago Pereira, Alejandro De Santiago Perez, Hunter Powell, Jenna Brown

Published: 2024-06-22 DOI: 10.17504/protocols.io.5jyl822n9l2w/v1

Abstract

DESS (DMSO/EDTA/NACL) protocol instructing how to make the solution for the preservation of samples.

Steps

Make 2L stock solution of 0.5M EDTA; if stock is already made, proceed to step 4.

1.

Combine 372.24g disodium EDTA and 500mLdeionized water. Tip: Disodium EDTA is labeled PINK in the Bik Lab.

2.

Add enough 5M NaOH to the solution to bring it to a pH of 8.0

Tip: NaOH is labeled GREEN in the Bik Lab.

Tip: In some cases, this can be as much as 500 mL. The EDTA will begin to dissolve around a pH of . 7.0.

3.

Bring final volume to 2Lwith deionized water once all disodium EDTA has dissolved.

Prepare 2L DESS from 0.5M EDTA.

4.

Combine 1L 0.5M disodium EDTA , 400mL Dimethyl Sulfoxide/DMSO , and 600mL deionized water in a 4000 mL Erlenmeyer flask.

Tip: 0.5M disodium EDTA is labeled YELLOW and Dimethyl Sulfoxide/DMSO is labeled ORANGE in the Bik Lab.

5.

Put magnetic stir bars in the solution and place flask onto a hot plate. Turn the magnetic stirring function on and leave it at room temperature.

6.

Add enough NaCl to saturate the solution: Add NaCl in 100g increments until 300g is reached, and then proceed to adding smaller amounts until salt is no longer dissolving. Solution should saturate with the addition of ~300-400g NaCl.

Tip: NaCl is labeled RED in the Bik Lab.

Tip: This step can take hours: BE PATIENT. There may be leftover salt residue once the solution is fully saturated.

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